Don't get your feathers ruffled up just yet Nathan. There is another side to the story. I've only been off active duty a year now, and I never heard a Christian chaplain not say "in Jesus name." It's never been an issue in my experience. The laws are very specific protecting them. So I think there's something else going on here.
He has made numerous public professions. Do you have a reason to doubt his salvation?
I for one have doubts about his doctrine, but knowing that as a young man he generally led a wasteful and meaningless life (by his own admission) and has since been able to conquer those sins, I see no reason to call into question his profession of faith.
I heard this chaplain and then a response from his fellow chaplain later on, both on the Sean Hannity show. The second chaplain, another Christian chaplain, said this guy was basicaly lying, though he used nicer words. I don't know what is going on in these ciorcumstances, but I would not be so quick to rush to any judgment on this without hearing all the facts. "Quick to listen, slow to speak, slow to wrath...."